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Improved Variable Selection with Second-Generation P-Values

dc.contributor.advisorBlume, Jeffrey D.
dc.creatorZuo, Yi
dc.date.accessioned2022-02-02T21:33:11Z
dc.date.available2022-02-02T21:33:11Z
dc.date.created2022-01
dc.date.issued2022-01-14
dc.date.submittedJanuary 2022
dc.identifier.urihttp://hdl.handle.net/1803/17038
dc.description.abstractMany statistical methods have been proposed for variable selection in the past decades, but few balance inference and prediction tasks well. Here we investigate a novel variable selection approach called Penalized regression with Second-Generation P-Values (ProSGPV). It captures the true model at the best rate achieved by current standards, is easy to implement in practice, and often yields the smallest parameter estimation error. The idea is to use an $\ell_0$ penalization scheme with second-generation p-values (SGPV), instead of classical p-values, to determine which variables remain in a model. The approach yields tangible advantages for balancing support recovery, parameter estimation, and prediction tasks in linear regression, logistic regression, Poisson regression, and Cox proportional hazards regression settings. The ProSGPV algorithm can maintain its good performance even when there is strong collinearity among features or when a high dimensional feature space with $p>n$ is considered. We present extensive simulations and real-world applications comparing the ProSGPV approach with current standards for variable selection. ProSGPV has superior inference performance and comparable prediction performance in certain scenarios. An R package is provided to implement the ProSGPV algorithm and yield variable selection results.
dc.format.mimetypeapplication/pdf
dc.language.isoen
dc.subjectVariable selection, penalized regression
dc.titleImproved Variable Selection with Second-Generation P-Values
dc.typeThesis
dc.date.updated2022-02-02T21:33:11Z
dc.type.materialtext
thesis.degree.namePhD
thesis.degree.levelDoctoral
thesis.degree.disciplineBiostatistics
thesis.degree.grantorVanderbilt University Graduate School
dc.creator.orcid0000-0002-6643-8326
dc.contributor.committeeChairChen, Qingxia


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