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Structural and Functional Dynamics of Serotonin Transporter Gene Variants

dc.creatorQuinlan , Meagan Anne
dc.date.accessioned2020-08-21T21:37:29Z
dc.date.available2020-03-25
dc.date.issued2019-03-25
dc.identifier.urihttps://etd.library.vanderbilt.edu/etd-03252019-134248
dc.identifier.urihttp://hdl.handle.net/1803/11365
dc.description.abstractThe antidepressant-sensitive serotonin (5-HT) transporter (Slc6a4; SERT) is a dynamically regulated membrane protein that tightly controls the signaling potential of 5-HT by rapidly clearing 5-HT from the extracellular space. Mechanistically, SERT translocate 5-HT across the membrane via an alternating-access mechanism, whereby 5-HT binds to the transporter when the 5-HT binding site is exposed to the extracellular space (outward-facing), leading to a conformational shift of the transporter to close gates that prevent dissociation of 5-HT and opening of gates that allow access of the 5-HT binding site to the cytosolic space (inward-facing). This process repeats after the transporter reorients to expose an unloaded 5-HT binding site to the extracellular. Previously, we found activation of the innate immune system, through a p38⍺ MAPK signaling pathway, shifts the transporter’s externally exposed 5-HT binding site to a high-affinity state (SERT*) that leads to an enhanced 5-HT rate of clearance. It appears that the SERT* state is constitutively-induced by two autism spectrum disorder (ASD)-associated SERT coding variants, SERT Ala56 and SERT Asn605, which are also insensitive to p38⍺ MAPK and protein kinase G (PKG) signaling. Here we show, using in vitro biochemical, as well as ex vivo physiological approaches, that the SERT Ala56 and SERT Asn605 variants stabilize an outward-facing conformation that can provide a mechanism for altered catalytic regulation of both variants, and constitutively increased 5-HT uptake observed with SERT Ala56. Proteomic analyses provide evidence that SERT Ala56 differentially interacts in vivo with proteins associated with ASD and proteins that affect SERT scaffolding and post-translational modifications (PTMs). To further explore the molecular features of SERT regulation in vivo, we used CRISPR/Cas9 approaches to generate the phosphorylation insensitive knock-in mouse, SERT Ala276, a residue implicated in PKG and p38⍺ MAPK regulation. Preliminary findings show SERT Ala276 mice demonstrate changes in social interactions and obsessive behavior. Overall, we hypothesize SERT conformation equilibrium can be shifted transiently in response to stimulation of signaling pathways or constitutively by engineered or disease-associated coding variants, which impact transporter PTMs and protein-protein interactions, ultimately affecting SERT activity.
dc.format.mimetypeapplication/pdf
dc.subjectSerotonin
dc.subjectAutism Spectrum Disorder
dc.subjectSerotonin Transporter
dc.titleStructural and Functional Dynamics of Serotonin Transporter Gene Variants
dc.typedissertation
dc.contributor.committeeMemberRandy Blakely, PhD
dc.contributor.committeeMemberKevin Schey
dc.contributor.committeeMemberHeidi Hamm, PhD
dc.contributor.committeeMemberAna Carnerio, PhD
dc.type.materialtext
thesis.degree.namePHD
thesis.degree.leveldissertation
thesis.degree.disciplinePharmacology
thesis.degree.grantorVanderbilt University
local.embargo.terms2020-03-25
local.embargo.lift2020-03-25
dc.contributor.committeeChairBrian Wadzinski, PhD


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